Posts Tagged 'Genomics'

Arthropod Roundup: Amphipods under the ice, high octane isopods, and the pea aphid genome

Quick blurbs about arthropod research and news:

  • NASA climate researchers have discovered animal life deep below the Pine Island Glacier Ice Shelf in Antarctica. The researchers drilled a hole six-hundred feet deep and eight inches wide into the glacial ice sheet about twelve miles from the open ocean. When they lowered a camera below the ice sheet, the scientists were surprised to see a Lyssianasid amphipod crustacean swim up and park on the cable. The researchers were only expecting to find microbial life under the ice sheet this far in from the open ocean. It is unknown what the primary energy source for animals living here could be. The presence of a three-inch amphipod, however, suggests a much more elaborate and dynamic ecosystem than hypothesized in this poorly understood habitat. (DSN has a video of the amphipod)
  • Limnoriid isopods, commonly called gribble worms for some reason (they neither are, nor resemble worms), have a ravenous appetite for wood. This is not unusual among arthropods; many diverse groups including termites, millipedes, and squat lobsters are capable of digesting woody plant matter. However, all these creatures process the wood with the aid of gut-dwelling symbiotic bacteria. A new study finds that the Limnoriid isopod, Limnoria quadripunctata is special in that it doesn’t rely on bacteria-produced catalysts to break down wood, but rather has the necessary glycosyl hydrolase enzymes incorporated into its genome. These enzymes are evolutionarily related to similar proteins found in arthropods, but their derived function for wood digestion in Limnoriid isopods is completely novel. The researchers, or their over-excitable university PR department, think the study of these enzymes could aid in bio fuel synthesis.
  • The gemone of the pea aphid, Acyrthosiphon pisum, has been sequenced. This is the first Hemipteran (true bug) genome and will provide clues about the evolutionary history of certain hexapod groups. This new genome could also help agriculturalists develop new techniques to control aphid pests and the spread of aphid-borne plant viruses. Researchers are also interested in the pea aphid’s, apparently, scaled down immune response system and their ability to easily switch specialization from one plant species to another.

Three parisitoid wasp genomes published

Last week I talked a bit about parisitoid fly larvae. Now, the genomes have has been published for three species of parisitoid wasps in Science. These guys are every bit as brutal as the flies, and then some. They forcibly inject their eggs into their insect hosts, often caterpillars. Some species inject multiple eggs while other inject a single egg that later divides into many cloned larvae that form a colonial social hierarchy within their host. Once they mature, the larvae burst out the side of their host. However, even this insult isn’t the end of the torture for the unfortunate caterpillar. The larvae employ mind controlling chemicals to force the caterpillar to use its silk to build them a cocoon, and then watch over its pupating murderers until it keels over dead.

Parisitoid wasp larvae from National Geographic’s, “In the Womb.” Watch in high quality for maximum revulsion.

Nature, you are one psychotic bitch.

Read this review for a wider overview of parasitoid wasps and their contributions to pest control and biological sciences, including discoveries made in the recent genomics work.

One interesting point jumped out at me. The parisitoid wasps are insanely diverse, with species estimates exceeding 600,000. Entomologist Michael Strand even posits that,

There’s a really compelling argument that these parasitoid wasps may be more diverse than beetles[.] Virtually every arthropod on Earth is attacked by one or more of these parasitoid wasps.

This extreme diversity seems to be tied to rapid evolvability (a concept that I have noted before in regards to arthropods) and rigid host specificity. While some wasps are generalists, laying eggs in a variety of arthropods, the vast majority parisitize a specific host species. This specificity is the result of evolutionarily optimized venoms and mind-controlling toxins, tailor made for their host species, and leading to rapid divergence of parisitoid wasp populations as they discover new host animals. This is not unlike the algal specificity of the sea slug I discussed last week. Its biology is ideally suited for maintaining chloroplasts taken up from a single species of algae.

Researchers hope to develop parisitoid wasps as a research model and exploit their prey specificity for pest control that will benefit agriculture. With bio-engineered parisitoid wasp terminators coming soon to a pasture near you, aphids and caterpillars should just cut their losses and run for their lives.

The Nasonia Genome Working Group, 2010. Functional and Evolutionary Insights from the Genomes of Three Parasitoid Nasonia Species. Science, 327(5963), 343-348.

I have moved.
Arthropoda can now be found here.

Michael Bok is a graduate student studying the visual system of mantis shrimp.

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